Data and Reports Explorer
Explore our library of NCCOS Technical Memos and various data sets. Filter by the type of publication, research category, region or contact. To access data and reports predating 2017, please visit the Legacy Publications Explorer.
Modeling Seabird Distributions off the Pacific Coast of Washington
This report presents seasonal distribution maps of selected seabird species off the Pacific coast of Washington. Maps were created to support state-led marine spatial planning by identifying ecologically important areas for seabirds. Seabird distribution maps were constructed by predicting relative density across the seascape using associative models linking at-sea seabird ...
Modeling the influence of hypoxia on the potential habitat of Atlantic sturgeon (Acipenser oxyrinchus): a comparison of two methods
Management of marine and estuarine fish and shellfish would benefit from a numerical approach that quantifies the impacts of climate variability and eutrophication. We present a proof-of-concept habitat volume model that incorporates predictions from a 3-dimensional biophysical model. Using temperature, salinity, and dissolved oxygen, habitat volumes were calculated based on ...
Modeling the Population Effects of Hypoxia on Atlantic Croaker (Micropogonias undulatus) in the Northwestern Gulf of Mexico: Part 1 – Model Description and Idealized Hypoxia
We developed a spatially explicit, individual-based model to analyze how hypoxia effects on reproduction, growth, and mortality of Atlantic croaker in the northwestern Gulf of Mexico lead to population-level responses. The model follows the hourly growth, mortality, reproduction, and movement of individuals on a 300 × 800 spatial grid of ...
Modeling the Population Effects of Hypoxia on Atlantic Croaker (Micropogonias undulatus) in the Northwestern Gulf of Mexico: Part 2 – Realistic Hypoxia and Eutrophication
Quantifying the population-level effects of hypoxia on coastal fish species has been challenging. In the companion paper (part 1), we described an individual-based population model (IBM) for Atlantic croaker in the northwestern Gulf of Mexico (NWGOM) designed to quantify the long-term population responses to low dissolved oxygen (DO) concentrations during ...
Modeling vertical coral connectivity and mesophotic refugia
Whether mesophotic reefs will behave as refugia for corals threatened by global climate change and coastal development depends on vertical exchange of larvae between diverse habitats. Here we use a biophysical model of larval dispersal to estimate vertical connectivity of a broadcasting (Orbicella faveolata) and a brooding (Porites astreoides) species ...
Models of habitat suitability, size, and age-class structure for the deep-sea black coral Leiopathes glaberrima in the Gulf of Mexico
Deep-sea corals are important components of the benthos in the Gulf of Mexico, because they provide structural complexity to associated species of fish and invertebrates, and they serve as proxies for environmental conditions on millennial time scales. In the Gulf of Mexico, large colonies of the black coral Leiopathes glaberrima ...
Models of harmful algal blooms: Conceptual, empirical, and numerical approaches
In June 2009, a workshop was convened under the auspices of the Global Ecology and Oceanography of Harmful Algal Blooms (GEOHAB) program to develop strategies for using observations and models to address the science questions articulated in the Open Science Meeting Reports for each of the GEOHAB Core Research Projects ...
Models: Tools for synthesis in international oceanographic research programs
Through its promotion of coordinated international research programs, the Intergovernmental Oceanographic Commission (IOC) has facilitated major progress on some of the most challenging problems in oceanography. Issues of global significancesuch as general ocean circulation, the carbon cycle, the structure and dynamics of ecosystems, and harmful algal bloomsare so large in ...
Moderate-Depth Benthic Habitats of St. John, U.S. Virgin Islands
This report describes the creation and assessment of a moderate-depth benthic habitat map for the Virgin Islands Coral Reef National Monument (VICRNM) south of St. John, U.S. Virgin Islands. The objective of this effort, conducted by NOAA's Center for Coastal Monitoring and Assessment's Biogeography Branch in partnership with the U.S ...
Molecular and biochemical responses of hypoxia exposure in Atlantic croaker collected from hypoxic regions in the northern Gulf of Mexico
A major impact of global climate change has been the marked increase worldwide in the incidence of coastal hypoxia (dissolved oxygen, DO<2.0 mg l-1). However, the extent of hypoxia exposure to motile animals such as fish collected from hypoxic waters as well as their molecular and physiological responses to environmental ...
Molecular Characterization and Hypoxia-Induced Upregulation of Neuronal Nitric Oxide Synthase in Atlantic Croaker: Reversal by Antioxidant and Estrogen Treatments
Neuronal nitric oxide synthase (nNOS) catalyzes production of nitric oxide in vertebrate brains. Recent findings indicate that endothelial NOS and reactive oxygen species (ROS) are significantly increased during hypoxic stress and are modulated by antioxidants. However, the influence of antioxidants and steroids on nNOS upregulation by hypoxia is largely unknown ...
Molecular Response of the Bloom-Forming Cyanobacterium, Microcystis aeruginosa, to Phosphorus Limitation
Cyanobacteria blooms caused by species such as Microcystis have become commonplace in many freshwater ecosystems. Although phosphorus (P) typically limits the growth of freshwater phytoplankton populations, little is known regarding the molecular response of Microcystis to variation in P concentrations and sources. For this study, we examined genes involved in ...
Molecular structure characterization of riverine and coastal dissolved organic matter with ion mobility quadrupole time-of-flight LCMS (IM Q-TOF LCMS)
Deciphering molecular structures of dissolved organic matter (DOM) components is key to understanding the formation and transformation of this globally important carbon pool in aquatic environments. Such a task depends on the integrated use of complementary analytical techniques. We characterize the molecular structure of natural DOM using an ion mobility ...
Mollusks taken by Beam Trawl in the vicinity of Grays Reef National Marine Sanctuary on the Continental Shelf off Georgia, Southeastern U.S.
Mollusks were sorted from samples of shell hash (obtained as bycatch during NOAA-sponsored studies of larval and juvenile fish distribution), and analyzed to gain qualitative insights on species composition, distribution and habitat affinities of the molluscan fauna on the continental shelf off Georgia. Samples came from beam trawls at 37 ...
Monitoring abnormal bio-optical and physical properties in the Gulf of Mexico
The dynamic bio-optical and physical ocean properties within the Gulf of Mexico (GoM) have been identified by the Ocean Weather Laboratory. Ocean properties from VIIRS satellite (Chlorophyll and Bio-Optics and SST) and ocean-circulation models (currents, SST and salinity) were used to identify regions of dynamic changing properties. The degree of ...
Monitoring Approaches for Early Warning of Domoic Acid Events in Washington State
On the U.S. west coast, blooms of the potentially toxic diatom Pseudo-nitzschia can cause amnesic shellfish poisoning (ASP), resulting in economic impacts to coastal economies and public health concerns. The transfer of toxin, via filter feeding of Pseudo-nitzschia or ingestion of filter feeding organisms, to shellfish, crustaceans, seabirds, finfish, and ...
Monitoring Hawaii’s Marine Protected Areas: Examining Spatial and Temporal Trends Using a Seascape Approach
Hawaii's coastal marine resources have declined dramatically over the past 100 years due to multiple anthropogenic stressors including overfishing, coastal development, pollution, overuse, invasive species and climate change. It is now becoming evident that ecosystem-based management, in the form of marine protected areas (MPAs), is necessary to conserve biodiversity, maintain ...
Monitoring Oregon Coastal Harmful Algae: Observations and Implications of a Harmful Algal Bloom-Monitoring Project
The accumulation of domoic acid (DA) and saxitoxins (STX), phycotoxins produced by some species of Pseudo-nitzschia and Alexandrium, respectively, in coastal food webs are a focus of research on the West Coast of the United States due to the deleterious effects they have on coastal ecosystems and economies. Results are ...
Montastraea cavernosa corallite structure demonstrates distinct morphotypes across shallow and mesophotic depth zones in the Gulf of Mexico
This study assessed morphological variation of the depth-generalist coral Montastraea cavernosa across shallow and mesophotic coral ecosystems in the Gulf of Mexico (GOM) using thirteen corallite metrics. While corallite structure differed significantly across sites, we observed that mean corallite diameters were smaller and spacing was greater in mesophotic corals as ...
Movement of Juvenile Weakfish (Cynoscion regalis) and Spot (Leistomus xanthurus) in Relation to Diel-cycling Hypoxia in an Estuarine Tributary: Assessment Using Acoustic Telemetry
Fish movement and the spatial and temporal dynamics of hypoxia determine hypoxia exposure and the effect of poor water quality on nursery habitat function. Although water quality criteria for dissolved oxygen (DO) are well defined, hypoxia exposure of juvenile estuary-dependent fishes in situ is largely unknown. Thirty-one juvenile weakfish Cynoscion ...