Data and Reports Explorer
Explore our library of NCCOS Technical Memos and various data sets. Filter by the type of publication, research category, region or contact. To access data and reports predating 2017, please visit the Legacy Publications Explorer.
Deep Coral and Associated Species Taxonomy and Ecology (DeepCAST) II Expedition report
The Deep Coral & Associated Species Taxonomy & Ecology (DeepCAST) II Expedition explored depths below the Meso-American Reef in Roatán, Honduras from 21- 28 May 2011. The team made six submersible dives between 1200 and 2200 feet deep (365 and 670 meters), conducting photo and video transects to estimate coral ...
Defining and documenting marine debris interactions with wildlife
Over the past several decades, the input of anthropogenic litter into the marine system has been an increasing global concern, with negative ecological and environmental consequences. Plastics, abandoned fishing gear and other debris can have serious effects on marine animals, via entanglement and ingestion. Wildlife stranding and response networks have ...
Defining reef fish habitat utilization patterns in Hawaii: comparisons between marine protected areas and areas open to fishing
Over the past 4 decades, Hawaii has developed a system of Marine Life Conservation Districts (MLCDs) to conserve and replenish marine resources. These MLCDs vary in size, habitat quality, and management regimes, providing an excellent opportunity to test hypotheses concerning marine protected area (MPA) design and function using multiple discreet ...
Demographic and reproductive plasticity across depth distribution of a coral reef fish
As humans expand into natural environments, populations of wild organisms may become relegated to marginal habitats at the boundaries of their distributions. In the ocean, mesophotic coral ecosystems (30–150 m) at the depth limit of photosynthetic reefs are hypothesized to act as refuges that are buffered from anthropogenic and natural disturbances, ...
Depth specialization in mesophotic corals (Leptoseris spp.) and associated algal symbionts in Hawaii
Corals at the lower limits of mesophotic habitats are likely to have unique photosynthetic adaptations that allow them to persist and dominate in these extreme low light ecosystems. We examined the hostsymbiont relationships from the dominant coral genus Leptoseris in mesophotic environments from Hawai'i collected by submersibles across a depth ...
Detecting copepod grazing on low-concentration populations of Alexandrium fundyense using PCR
Zooplankton grazing is often a significant loss term for phytoplankton populations, including harmful algae, impacting the development and decline of blooms. However, detecting and quantifying predation on phytoplankton is often challenging, particularly during early bloom stages when phytoplankton cell concentrations are low. In this study, we used polymerase chain reaction ...
Detecting toxic diatom blooms from ocean color and a regional ocean model
An apparent link between upwelling-related physical signatures, macronutrients, and toxic diatom blooms in the various hotspots throughout California has motivated attempts to forecast harmful algal blooms (HABs) as a function of select environmental variables. Empirical models for predicting toxic Pseudo-nitzschia blooms in one such region, the Santa Barbara Channel (SBC), ...
Developing and managing transdisciplinary and transformative research on the coastal dynamics of sea level rise: Experiences and lessons learned
There is increasing emphasis from funding agencies on transdisciplinary approaches to integrate science and end-users. However, transdisciplinary research can be laborious and costly and knowledge of effective collaborative processes in these endeavors is incomplete. More guidance grounded in actual project experiences is needed. Thus, this article describes and examines the ...
Developing Social and Economic Indicators for Monitoring the U.S. Coral Reef Jurisdictions: Report from a Scientific Workshop to Support the National Coral Reef Monitoring Program, Hollings Marine Laboratory June 13-15, 2012
To support the development of indicators, methods and measures for the National Coral Reef Monitoring Plan, the NOAA Coral Reef Conservation Program sponsored a workshop for scientists to review the socioeconomic plan, validate and refine the indicators and develop secondary data measures. Held at the National Centers for Coastal Ocean ...
Development of Benthic and Fish Monitoring Protocols for the Atlantic/Caribbean Biological Team: National Coral Reef Monitoring Program
NOAA’s Coral Reef Conservation Program is developing a national monitoring plan for all coral reefs under the US jurisdiction – including Pacific, Atlantic, Gulf and Caribbean. This National Coral Reef Monitoring Plan (NCRMP) builds upon a decade of work supported by CRCP and will focus on four monitoring themes: benthic ...
Diadromous fish stocks of America’s southeastern Atlantic coast
Given the dire state of many diadromous stocks and their potential as important agents in marine ecosystems, consideration should be given to the different roles stocks play and their relative importance within marine systems. In this report, diadromous stocks of North America's Atlantic coast are reviewed with a focus on ...
Diel differences in abundance and diversity of fish species and blue crab (Callinectes sapidus) in the sandy beach shore zone of lower Delaware Bay
Diel sampling was conducted during JuneSeptember 2013, in the shore zone and adjacent nearshore zone of Delaware Bay, Delaware, to identify day and night changes in nekton density, species richness, and the species assemblage. Mean species richness and total nekton density in the shore zone were higher at night. A ...
Direct and indirect impacts of shoreline development on shallow-water benthic communities in a depauperate estuarine system
Modification of natural coastlines is prevalent as human coastal populations swell and effects of global climate change become clearer. We investigated effects of shoreline hardening and environmental factors on benthic infauna and trophic structure in the Patuxent River, Maryland, a stressed mesohaline Chesapeake Bay tributary. We characterized differences in density, ...
Direct Setting of Eastern Oyster (Crassostrea virginica) Larvae Confirmed with Calcein, a Fluorochrome Dye
Ongoing efforts to restore eastern oyster (Crassostrea virginica) populations in regions of low natural recruitment rely on stocking of juveniles (spat on shell) to rebuild populations. Often, remote setting is used, entailing releasing hatchery-produced larvae into recirculating tanks filled with oyster shells. Other restoration methods that rely on releasing C ...
Dispersal of Mississippi and Atchafalaya Sediment on the Texas-Louisiana Shelf: Model Estimates for the Year 1993
A three-dimensional coupled hydrodynamic-sediment transport model for the TexasLouisiana continental shelf was developed using the Regional Ocean Modeling System (ROMS) and used to represent fluvial sediment transport and deposition for the year 1993. The model included water and sediment discharge from the Mississippi River and Atchafalaya Bay, seabed resuspension, and ...
Distance maps to estimate cell volume from two-dimensional plankton images
We describe and evaluate an algorithm that uses a distance map to automatically calculate the biovolume of a planktonic organism from its two-dimensional boundary. Compared with existing approaches, this algorithm dramatically increases the speed and accuracy of biomass estimates from plankton images, and is thus especially suited for use with ...
Distribution and potential bioeffects of atrazine in coastal waters
Estuaries provide critical nursery habitat for many commercially and recreationally important fish and shellfish species. These productive, diverse ecosystems are particularly vulnerable to pollution because they serve as repositories for nonpoint-source contaminants from upland sources, such as pesticide runoff. Atrazine, among the most widely used pesticides in the United States, ...
Distribution of deep-water corals, sponges, and demersal fisheries landings in Southern California, USA: implications for conservation priorities
Deep-sea corals in Southern California are diverse and abundant but subject to multiple stressors, including bottom-contact fisheries using mobile and fixed gear. There is a need for more information on the distribution of these taxa in relation to the distribution of demersal fishing effort, and the distribution of marine protected ...
Distribution of Persistent Organic Contaminants in Canyons and on the Continental Shelf off Central California
The National Centers for Coastal Ocean Science, and the Office of National Marine Sanctuaries, in cooperation with the U.S. Geological Survey (USGS), University of California Moss Landing Marine Lab (MLML), and the Monterey Bay Aquarium Research Institute (MBARI), conducted ecosystem monitoring and characterization studies within and between marine sanctuaries along ...
Diurnal Fluctuations in Acidification and Hypoxia Reduce Growth and Survival of Larval and Juvenile Bay Scallops (Argopecten irradians) and Hard Clams (Mercenaria mercenaria)
Diurnal variations in pH and dissolved oxygen (DO) concentrations are common seasonal phenomena in many eutrophic estuaries, yet few studies have investigated the concurrent effects of low pH and low DO on marine organisms inhabiting these coastal systems. Here, we assess the effects of diurnal variations in pH and DO ...