The coastal waters of the northern portion of the California Current System experience a seasonal decline in oxygen concentrations and hypoxia over the summer upwelling season that results in negative impacts on habitat for many organisms. Using a regional model extending from 43°N to 50°N, with an oxygen component developed ...

Moored observations are used to investigate the seasonal change in vertical structure of the cross-shelf circulation at a midshelf location in the northern California Current System. A streamwise–normal coordinate system is employed to eliminate meander- and eddy-induced biases in the cross-shelf flow that are unaccounted for with an alternative, commonly ...

The presence of neurotoxic species within the genus Alexandrium along the U.S. coastline has raised concern of potential poisoning through the consumption of contaminated seafood. Paralytic shellfish toxins (PSTs) detected in shellfish provide evidence that these harmful events have increased in frequency and severity along the California coast during the ...

Although sediment dynamics exert a fundamental control on the character and distribution of reefs, data on sediment dynamics in mesophotic systems are scarce. In this study, sediment traps and benthic photo-transects were used to document spatial and temporal patterns of suspended-sediment and bed-load dynamics at two geomorphically distinct mesophotic coral ...

Benthic–pelagic coupling in shallow estuarine and coastal environments is an important mode of particle and solute exchange and can influence lag times in the recovery of eutrophic ecosystems. Links between the water column and sediments are mediated by particulate organic matter (POM) deposition to the sediment and its subsequent decomposition ...

Paired sediment contaminant and benthic infaunal data from prior studies following the 2010 Deepwater Horizon (DWH) oil spill in the Gulf of Mexico were analyzed using logistic regression models (LRMs) to derive sediment quality benchmarks for assessing risks of oil‐related impacts to the deep‐sea benthos. Sediment total polycyclic aromatic hydrocarbon ...

Contact Tim.Battista@noaa.gov for digital PDF copy. The purpose of this Atlas is to provide detailed maps depicting the GIS benthic habitat data produced, and outline the benthic habitat classification scheme and protocols used to map American Samoa, Guam and the Commonwealth of the Northern Mariana Islands. Thirty-four distinct benthic habitat ...

The National Oceanic and Atmospheric Administration (NOAA) National Ocean Service (NOS) initiated a coral reef research program in 1999 to map, assess, inventory, and monitor U.S. coral reef ecosystems (Monaco et al. 2001). These activities were implemented in response to requirements outlined in the Mapping Implementation Plan developed by the ...

This report describes the development and assessment of shallow-water (0<35 m) benthic habitat maps for Northeast Puerto Rico and Culebra Island. The objective of this effort, conducted by NOAA's National Centers for Coastal Ocean Science (NCCOS) in partnership with the Departamento de Recursos Naturales y Ambientales (DRNA), was to provide ...

This report documents the entire process of benthic habitat mapping in St. John. Chapter 1 provides a description of the benthic habitat classification scheme used to categorize the different habitats existing in the nearshore environment. Chapter 2 describes the steps required to create a benthic habitat map from visual interpretation ...

We used structured expert judgment and economic analysis to quantify annual impacts on ecosystem services in the Great Lakes, North America of nonindigenous aquatic species introduced by ocean-going ships. For the US waters, median damages aggregated across multiple ecosystem services were Open image in new window 138 million per year, ...

Coastal shoreline hardening is intensifying due to human population growth and sea level rise. Prior studies have emphasized shoreline-hardening effects on faunal abundance and diversity; few have examined effects on faunal biomass and size structure or described effects specific to different functional groups. We evaluated the biomass and size structure ...

Effective management of rare species, including endangered native species and recently introduced nonindigenous species, requires the detection of populations at low density. For endangered species, detecting the localized distribution makes it possible to identify and protect critical habitat to enhance survival or reproductive success. Similarly, early detection of an incipient ...

The Shellfish Information Management System (SIMS) is a web-based application designed in partnership with the Interstate Shellfish Sanitation Conference (ISSC) to integrate information important to coastal managers responsible for ensuring the safe harvest of mulluscan shellfish. While the primary purpose of SIMS is to map and analyze classified waters, both ...

The continental shelf of the northern Gulf of Mexico receives high dissolved inorganic nitrogen and phosphorus loads from the Mississippi and Atchafalaya rivers. The nutrient load results in high primary production in the river plumes and contributes to the development of hypoxia on the Louisiana shelf in summer. While phytoplankton ...

We hypothesized that the grazing on phytoplankton by the microzooplankton community is size-dependent and, therefore, the top-down control on phytoplankton by microzooplankton community could be one possible mechanism explaining why small phytoplankton become less abundant than large phytoplankton in eutrophic waters. We tested this hypothesis using the dilution method to ...

Simulation models coupling physics to biological processes in the ocean are central to many current programs. Ocean physical models have approached a high level of sophistication; the physical relationships are canonical, and modern computational technology for fluid mechanics has advanced steadily for two generations or more. The complexity of biological ...

Coupled biological/physical models of marine systems serve many purposes including the synthesis of information, hypothesis generation, and as a tool for numerical experimentation. However, marine system models are increasingly used for prediction to support high-stakes decision-making. In such applications it is imperative that a rigorous model skill assessment is conducted ...

A numerical hydrodynamic simulation of the Texas-Louisiana continental shelf circulation is compared with hydrographic and moored observations of temperature, salinity, and current velocity. The spatial and temporal structure of the model error suggests that the model is able to reproduce the observed broad-scale features and seasonal patterns faithfully. However, there ...

Since 2012, NOAA has generated model guidance for the probability of occurrence of the harmful marine bacteria Vibrio vulnificus in Chesapeake Bay. The system employs NOAAs Operational Forecast System for Chesapeake Bay (CBOFS) to force a statistical model developed by NCCOS and provides daily guidance for the entirety of the ...