Data and Reports Explorer
Explore our library of data sets. We no longer maintain reports in this repository. Visit NOAA’s Institutional Repository for the full list of NCCOS publications. To access data and reports predating 2017, please visit the Legacy Publications Explorer.
Sediment Flux Modeling: Calibration and application for coastal systems
Benthicpelagic coupling in shallow estuarine and coastal environments is an important mode of particle and solute exchange and can influence lag times in the recovery of eutrophic ecosystems. Links between the water column and sediments are mediated by particulate organic matter (POM) deposition to the sediment and its subsequent decomposition ...
Sediment quality benchmarks for assessing oil-related impacts to the deep-sea benthos
Paired sediment contaminant and benthic infaunal data from prior studies following the 2010 Deepwater Horizon (DWH) oil spill in the Gulf of Mexico were analyzed using logistic regression models (LRMs) to derive sediment quality benchmarks for assessing risks of oil‐related impacts to the deep‐sea benthos. Sediment total polycyclic aromatic hydrocarbon ...
Shallow-Water Benthic Habitats of American Samoa, Guam, and the Commonwealth of the Northern Mariana Islands
Contact Tim.Battista@noaa.gov for digital PDF copy. The purpose of this Atlas is to provide detailed maps depicting the GIS benthic habitat data produced, and outline the benthic habitat classification scheme and protocols used to map American Samoa, Guam and the Commonwealth of the Northern Mariana Islands. Thirty-four distinct benthic habitat ...
Shallow-Water Benthic Habitats of American Samoa, Guam, and the Commonwealth of the Northern Mariana Islands: Manual
The National Oceanic and Atmospheric Administration (NOAA) National Ocean Service (NOS) initiated a coral reef research program in 1999 to map, assess, inventory, and monitor U.S. coral reef ecosystems (Monaco et al. 2001). These activities were implemented in response to requirements outlined in the Mapping Implementation Plan developed by the ...
Shallow-water benthic habitats of Northeast Puerto Rico and Culebra Island
This report describes the development and assessment of shallow-water (0<35 m) benthic habitat maps for Northeast Puerto Rico and Culebra Island. The objective of this effort, conducted by NOAA's National Centers for Coastal Ocean Science (NCCOS) in partnership with the Departamento de Recursos Naturales y Ambientales (DRNA), was to provide ...
Shallow-water benthic habitats of St. John, U.S. Virgin Islands
This report documents the entire process of benthic habitat mapping in St. John. Chapter 1 provides a description of the benthic habitat classification scheme used to categorize the different habitats existing in the nearshore environment. Chapter 2 describes the steps required to create a benthic habitat map from visual interpretation ...
Ship-borne Nonindigenous Species Diminish Great Lakes Ecosystem Services
We used structured expert judgment and economic analysis to quantify annual impacts on ecosystem services in the Great Lakes, North America of nonindigenous aquatic species introduced by ocean-going ships. For the US waters, median damages aggregated across multiple ecosystem services were Open image in new window 138 million per year, ...
Shoreline Hardening Affects Nekton Biomass, Size Structure, and Taxonomic Diversity in Nearshore Waters, with Responses Mediated by Functional Species Groups
Coastal shoreline hardening is intensifying due to human population growth and sea level rise. Prior studies have emphasized shoreline-hardening effects on faunal abundance and diversity; few have examined effects on faunal biomass and size structure or described effects specific to different functional groups. We evaluated the biomass and size structure ...
Sight-unseen detection of rare aquatic species using environmental DNA
Effective management of rare species, including endangered native species and recently introduced nonindigenous species, requires the detection of populations at low density. For endangered species, detecting the localized distribution makes it possible to identify and protect critical habitat to enhance survival or reproductive success. Similarly, early detection of an incipient ...
SIMS: A Shellfish Information Management System for Molluscan Shellfish Growing Waters
The Shellfish Information Management System (SIMS) is a web-based application designed in partnership with the Interstate Shellfish Sanitation Conference (ISSC) to integrate information important to coastal managers responsible for ensuring the safe harvest of mulluscan shellfish. While the primary purpose of SIMS is to map and analyze classified waters, both ...
Simulating the effects of phosphorus limitation in the Mississippi and Atchafalaya River plumes
The continental shelf of the northern Gulf of Mexico receives high dissolved inorganic nitrogen and phosphorus loads from the Mississippi and Atchafalaya rivers. The nutrient load results in high primary production in the river plumes and contributes to the development of hypoxia on the Louisiana shelf in summer. While phytoplankton ...
Size-dependent top-down control on phytoplankton growth by microzooplankton in eutrophic lakes
We hypothesized that the grazing on phytoplankton by the microzooplankton community is size-dependent and, therefore, the top-down control on phytoplankton by microzooplankton community could be one possible mechanism explaining why small phytoplankton become less abundant than large phytoplankton in eutrophic waters. We tested this hypothesis using the dilution method to ...
Skill assessment for coupled biological/physical models of marine systems
Simulation models coupling physics to biological processes in the ocean are central to many current programs. Ocean physical models have approached a high level of sophistication; the physical relationships are canonical, and modern computational technology for fluid mechanics has advanced steadily for two generations or more. The complexity of biological ...
Skill Assessment for Coupled Biological/Physical Models of Marine Systems
Coupled biological/physical models of marine systems serve many purposes including the synthesis of information, hypothesis generation, and as a tool for numerical experimentation. However, marine system models are increasingly used for prediction to support high-stakes decision-making. In such applications it is imperative that a rigorous model skill assessment is conducted ...
Skill assessment of a hydrodynamic model of circulation over the Texas-Louisiana continental shelf
A numerical hydrodynamic simulation of the Texas-Louisiana continental shelf circulation is compared with hydrographic and moored observations of temperature, salinity, and current velocity. The spatial and temporal structure of the model error suggests that the model is able to reproduce the observed broad-scale features and seasonal patterns faithfully. However, there ...
Skill assessment of NOAA’s Chesapeake Bay Vibrio vulnificus model
Since 2012, NOAA has generated model guidance for the probability of occurrence of the harmful marine bacteria Vibrio vulnificus in Chesapeake Bay. The system employs NOAAs Operational Forecast System for Chesapeake Bay (CBOFS) to force a statistical model developed by NCCOS and provides daily guidance for the entirety of the ...
Small Spatial Scale Variation in Fish Assemblage Structure in the Vicinity of the Northwestern Gulf of Mexico Hypoxic Zone
Seasonal hypoxia [dissolved oxygen (DO)???2 mg?l?1] occurs over large regions of the northwestern Gulf of Mexico continental shelf during the summer months (JuneAugust) as a result of nutrient enrichment from the MississippiAtchafalaya River system. We characterized the community structure of mobile fishes and invertebrates (i.e., nekton) in and around the ...
Soft-Bottom Benthic Assemblages and Levels of Contaminants in Sediments and Biota at Gray’s Reef National Marine Sanctuary and Nearby Shelf Waters off the Coast of Georgia (2000 and 2001)
A series of studies was initiated to assess the condition of benthic macroinfauna and chemical contaminant levels in sediments and biota of the Gray's Reef National Marine Sanctuary (GRNMS) and nearby shelf waters off the coast of Georgia. Four key objectives of the research are (1) to document existing environmental ...
Southeast Deep Coral Initiative: Exploring Deep-Sea Coral Ecosystems off the Southeast United States
In 2016, NOAA launched a four-year initiative to study deep-sea coral ecosystems in waters off the southeast United States. This multidisciplinary effort, known as the Southeast Deep Coral Initiative (SEDCI), is led by a NOAA team from multiple offices and works in collaboration with partners from federal and academic institutions ...
Southeast Florida Reef Tract Water Quality Assessment
Coral reefs are vibrant, productive ecosystems that face a variety of threats, including disease, temperature stress and pollution. In order to effectively manage coral reef resources, adequate data are required to assess status and track change in these systems. The state of Florida has over 100 linear miles of coral ...